Genome Details
Selected Rep_genome_ID: HRGMv2_0372
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp938014215
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0372 | 2,934,622 | 99.51% | 0.961% | Luxembourg | Europe | HRGM |
| MGYG000002203 | 2,806,770 | 97.56% | 0.96% | Spain | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0372_CGC12 | CGCFAM_05587 | Yes | 3 | 1 | |
| HRGMv2_0372_CGC40 | CGCFAM_05660 | Yes | 6 | 2 | |
| HRGMv2_0372_CGC38 | CGCFAM_06652 | Yes | 8 | 4 | |
| HRGMv2_0372_CGC11 | CGCFAM_08259 | Yes | 11 | 4 | |
| HRGMv2_0372_CGC14 | CGCFAM_09181 | Yes | 4 | 1 |
Top CAZyme Families