Genome Details
Selected Rep_genome_ID: HRGMv2_0195
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp900538385
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR017632 | 1,946,588 | 97.62% | 0.47% | China | Asia | CGMR |
| HRGMv2_0195 | 2,137,533 | 99.92% | 0% | South Korea | Asia | HRGM |
| MGYG000002784 | 2,012,007 | 99.92% | 0% | United States | North America | UHGG |
| Rep_105 | 2,068,085 | 98.1132% | 0.314465% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0195_CGC10 | CGCFAM_05902 | Yes | 3 | 1 | |
| HRGMv2_0195_CGC9 | CGCFAM_05955 | Yes | 8 | 1 | |
| HRGMv2_0195_CGC12 | CGCFAM_09537 | Yes | 5 | 1 |
Top CAZyme Families