Cluster: HRGMv2_0195_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0195
- CGC Family ID: CGCFAM_09537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0195_17 | HRGMv2_0195_17_18 | 26126 | 27262 | + | GT19 |
| STP | HRGMv2_0195_17 | HRGMv2_0195_17_19 | 27926 | 30082 | - | B12-binding |
| pfam | HRGMv2_0195_17 | HRGMv2_0195_17_20 | 30107 | 31981 | - | MM_CoA_mutase |
| TC | HRGMv2_0195_17 | HRGMv2_0195_17_21 | 32150 | 32953 | - | 1.B.42.1.2 |
| TC | HRGMv2_0195_17 | HRGMv2_0195_17_22 | 32962 | 34638 | - | 2.A.81.1.2 |
Gene ID: HRGMv2_0195_17_18
Type: CAZyme
Location: 26126 - 27262 (+)
Type: CAZyme
Location: 26126 - 27262 (+)
Gene ID: HRGMv2_0195_17_19
Type: STP
Location: 27926 - 30082 (-)
Type: STP
Location: 27926 - 30082 (-)
Gene ID: HRGMv2_0195_17_20
Type: pfam
Location: 30107 - 31981 (-)
Type: pfam
Location: 30107 - 31981 (-)
Gene ID: HRGMv2_0195_17_21
Type: TC
Location: 32150 - 32953 (-)
Type: TC
Location: 32150 - 32953 (-)
Gene ID: HRGMv2_0195_17_22
Type: TC
Location: 32962 - 34638 (-)
Type: TC
Location: 32962 - 34638 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas sp900538385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.