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Cluster: HRGMv2_0195_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0195_11 HRGMv2_0195_11_45 50995 52812 + 4.C.1.1.14
pfam HRGMv2_0195_11 HRGMv2_0195_11_46 53048 54013 + RF-1 | PCRF
TC HRGMv2_0195_11 HRGMv2_0195_11_47 54023 55846 + 3.A.7.7.1
NULL(UNKNOWN) HRGMv2_0195_11 HRGMv2_0195_11_48 56005 56160 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0195_11 HRGMv2_0195_11_49 56268 57023 + GT2
peptidase HRGMv2_0195_11 HRGMv2_0195_11_50 57025 58380 + M38.UNW
STP HRGMv2_0195_11 HRGMv2_0195_11_51 58556 58972 + Glyoxalase
TC HRGMv2_0195_11 HRGMv2_0195_11_52 59006 60559 + 3.B.1.1.2
Gene ID: HRGMv2_0195_11_45
Type: TC
Location: 50995 - 52812 (+)
Gene ID: HRGMv2_0195_11_46
Type: pfam
Location: 53048 - 54013 (+)
Gene ID: HRGMv2_0195_11_47
Type: TC
Location: 54023 - 55846 (+)
Gene ID: HRGMv2_0195_11_48
Type:
Location: 56005 - 56160 (-)
Gene ID: HRGMv2_0195_11_49
Type: CAZyme
Location: 56268 - 57023 (+)
Gene ID: HRGMv2_0195_11_50
Type: peptidase
Location: 57025 - 58380 (+)
Gene ID: HRGMv2_0195_11_51
Type: STP
Location: 58556 - 58972 (+)
Gene ID: HRGMv2_0195_11_52
Type: TC
Location: 59006 - 60559 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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