Genome Details
Selected Rep_genome_ID: GH163_54
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH163_54 | 3,491,399 | 98.61% | 0.74% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH163_54_CGC7 | CGCFAM_00001 | Yes | 6 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| GH163_54_CGC22 | CGCFAM_00028 | Yes | 6 | 3 | |
| GH163_54_CGC36 | CGCFAM_00034 | Yes | 7 | 4 | |
| GH163_54_CGC30 | CGCFAM_00108 | Yes | 9 | 3 | pectin |
| GH163_54_CGC34 | CGCFAM_00180 | Yes | 6 | 2 | |
| GH163_54_CGC21 | CGCFAM_00303 | Yes | 6 | 3 | |
| GH163_54_CGC32 | CGCFAM_00324 | Yes | 3 | 1 | |
| GH163_54_CGC20 | CGCFAM_00358 | Yes | 4 | 2 | |
| GH163_54_CGC5 | CGCFAM_00548 | Yes | 10 | 4 | |
| GH163_54_CGC12 | CGCFAM_00604 | Yes | 19 | 1 | |
| GH163_54_CGC10 | CGCFAM_00897 | Yes | 6 | 2 | |
| GH163_54_CGC28 | CGCFAM_01287 | Yes | 4 | 1 | |
| GH163_54_CGC6 | CGCFAM_03968 | Yes | 9 | 5 | |
| GH163_54_CGC1 | CGCFAM_04154 | Yes | 9 | 5 | |
| GH163_54_CGC15 | CGCFAM_04253 | Yes | 5 | 2 | |
| GH163_54_CGC29 | CGCFAM_05782 | Yes | 3 | 1 | |
| GH163_54_CGC3 | CGCFAM_05922 | Yes | 4 | 1 | |
| GH163_54_CGC4 | CGCFAM_07371 | Yes | 4 | 1 | |
| GH163_54_CGC19 | CGCFAM_09034 | Yes | 5 | 1 | |
| GH163_54_CGC18 | CGCFAM_09446 | Yes | 5 | 2 | |
| GH163_54_CGC33 | CGCFAM_09447 | Yes | 5 | 1 |
Top CAZyme Families