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Cluster: GH163_54_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_236496 k141_236496_20 43559 45997 - GH51_2
CAZyme k141_236496 k141_236496_21 46038 47063 - GH43_5
CAZyme k141_236496 k141_236496_22 47095 49785 - GH43_4
pfam k141_236496 k141_236496_23 49847 51571 - Big_3
pfam k141_236496 k141_236496_24 51605 53359 - SusD_RagB | SusD-like_3
TC k141_236496 k141_236496_25 53396 56602 - 1.B.14.6.1
TF k141_236496 k141_236496_26 57283 60240 - HTH_AraC
pfam k141_236496 k141_236496_27 60413 61492 + Cons_hypoth698
TC k141_236496 k141_236496_28 61913 63745 - 2.A.47.4.8
Gene ID: k141_236496_20
Type: CAZyme
Location: 43559 - 45997 (-)
Gene ID: k141_236496_21
Type: CAZyme
Location: 46038 - 47063 (-)
Gene ID: k141_236496_22
Type: CAZyme
Location: 47095 - 49785 (-)
Gene ID: k141_236496_23
Type: pfam
Location: 49847 - 51571 (-)
Gene ID: k141_236496_24
Type: pfam
Location: 51605 - 53359 (-)
Gene ID: k141_236496_25
Type: TC
Location: 53396 - 56602 (-)
Gene ID: k141_236496_26
Type: TF
Location: 57283 - 60240 (-)
Gene ID: k141_236496_27
Type: pfam
Location: 60413 - 61492 (+)
Gene ID: k141_236496_28
Type: TC
Location: 61913 - 63745 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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