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Cluster: GH163_54_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_40849 k141_40849_13 18574 19626 + GT2
CAZyme k141_40849 k141_40849_14 19636 20472 + GT2
CAZyme k141_40849 k141_40849_15 20500 21540 + GT4
pfam k141_40849 k141_40849_16 21632 22897 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_40849 k141_40849_17 22915 23937 + GT2
pfam k141_40849 k141_40849_18 23943 25157 + Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
TC k141_40849 k141_40849_19 25169 25756 + 9.B.18.1.3
TC k141_40849 k141_40849_20 25877 27787 + 9.B.18.2.1
NULL(UNKNOWN) k141_40849 k141_40849_21 29477 29653 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_40849 k141_40849_22 30080 32779 - 3.A.3.2.17
Gene ID: k141_40849_13
Type: CAZyme
Location: 18574 - 19626 (+)
Gene ID: k141_40849_14
Type: CAZyme
Location: 19636 - 20472 (+)
Gene ID: k141_40849_15
Type: CAZyme
Location: 20500 - 21540 (+)
Gene ID: k141_40849_16
Type: pfam
Location: 21632 - 22897 (+)
Gene ID: k141_40849_17
Type: CAZyme
Location: 22915 - 23937 (+)
Gene ID: k141_40849_18
Type: pfam
Location: 23943 - 25157 (+)
Gene ID: k141_40849_19
Type: TC
Location: 25169 - 25756 (+)
Gene ID: k141_40849_20
Type: TC
Location: 25877 - 27787 (+)
Gene ID: k141_40849_21
Type:
Location: 29477 - 29653 (-)
Gene ID: k141_40849_22
Type: TC
Location: 30080 - 32779 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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