Genome Details
Selected Rep_genome_ID: GH026_158
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH026_158 | 2,606,998 | 97.04% | 1.08% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH026_158_CGC14 | CGCFAM_00001 | Yes | 7 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| GH026_158_CGC3 | CGCFAM_00009 | Yes | 3 | 1 | |
| GH026_158_CGC1 | CGCFAM_00062 | Yes | 7 | 2 | beta-glucan |
| GH026_158_CGC12 | CGCFAM_00282 | Yes | 5 | 3 | |
| GH026_158_CGC2 | CGCFAM_00492 | Yes | 4 | 1 | |
| GH026_158_CGC16 | CGCFAM_00505 | Yes | 7 | 2 | |
| GH026_158_CGC10 | CGCFAM_01779 | Yes | 10 | 4 | |
| GH026_158_CGC11 | CGCFAM_03830 | Yes | 3 | 1 | |
| GH026_158_CGC9 | CGCFAM_04565 | Yes | 4 | 1 | |
| GH026_158_CGC15 | CGCFAM_04909 | Yes | 6 | 2 | |
| GH026_158_CGC13 | CGCFAM_09370 | Yes | 4 | 1 | |
| GH026_158_CGC4 | CGCFAM_09371 | Yes | 5 | 2 |
Top CAZyme Families