Cluster: GH026_158_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: GH026_158
- CGC Family ID: CGCFAM_00001
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_225980 | k141_225980_4 | 4711 | 7965 | - | 1.B.14.6.1 |
| peptidase | k141_225980 | k141_225980_5 | 8221 | 9453 | - | M16.UPB |
| CAZyme | k141_225980 | k141_225980_6 | 9631 | 11646 | - | GH97 |
| pfam | k141_225980 | k141_225980_7 | 12080 | 13942 | - | SusD_RagB | SusD-like_3 |
| TC | k141_225980 | k141_225980_8 | 13980 | 17183 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_225980 | k141_225980_9 | 17476 | 18240 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_225980 | k141_225980_10 | 18618 | 20570 | + | GH87 |
Gene ID: k141_225980_4
Type: TC
Location: 4711 - 7965 (-)
Type: TC
Location: 4711 - 7965 (-)
Gene ID: k141_225980_5
Type: peptidase
Location: 8221 - 9453 (-)
Type: peptidase
Location: 8221 - 9453 (-)
Gene ID: k141_225980_6
Type: CAZyme
Location: 9631 - 11646 (-)
Type: CAZyme
Location: 9631 - 11646 (-)
Gene ID: k141_225980_7
Type: pfam
Location: 12080 - 13942 (-)
Type: pfam
Location: 12080 - 13942 (-)
Gene ID: k141_225980_8
Type: TC
Location: 13980 - 17183 (-)
Type: TC
Location: 13980 - 17183 (-)
Gene ID: k141_225980_9
Type:
Location: 17476 - 18240 (-)
Type:
Location: 17476 - 18240 (-)
Gene ID: k141_225980_10
Type: CAZyme
Location: 18618 - 20570 (+)
Type: CAZyme
Location: 18618 - 20570 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.