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Cluster: GH026_158_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_589284 k141_589284_58 66531 67625 + GT4
CAZyme k141_589284 k141_589284_59 67622 68662 + GT4
pfam k141_589284 k141_589284_60 68748 69953 + Wzy_C
CAZyme k141_589284 k141_589284_61 69859 70740 - GT2
pfam k141_589284 k141_589284_62 70737 71450 - Kdo
CAZyme k141_589284 k141_589284_63 71441 72382 - GT9
pfam k141_589284 k141_589284_64 72435 73040 - DUF4254
TC k141_589284 k141_589284_65 73080 74531 - 1.B.73.2.2
pfam k141_589284 k141_589284_66 74545 75483 - Kelch_1 | Kelch_1 | Kelch_2 | Kelch_3 | Kelch_3 | Kelch_4 | Kelch_4 | Kelch_HCF | Kelch_6 | Kelch_6 | Kelch_KLHDC2_KLHL20_DRC7
TC k141_589284 k141_589284_67 75562 76305 - 1.B.42.1.2
Gene ID: k141_589284_58
Type: CAZyme
Location: 66531 - 67625 (+)
Gene ID: k141_589284_59
Type: CAZyme
Location: 67622 - 68662 (+)
Gene ID: k141_589284_60
Type: pfam
Location: 68748 - 69953 (+)
Gene ID: k141_589284_61
Type: CAZyme
Location: 69859 - 70740 (-)
Gene ID: k141_589284_62
Type: pfam
Location: 70737 - 71450 (-)
Gene ID: k141_589284_63
Type: CAZyme
Location: 71441 - 72382 (-)
Gene ID: k141_589284_64
Type: pfam
Location: 72435 - 73040 (-)
Gene ID: k141_589284_65
Type: TC
Location: 73080 - 74531 (-)
Gene ID: k141_589284_66
Type: pfam
Location: 74545 - 75483 (-)
Gene ID: k141_589284_67
Type: TC
Location: 75562 - 76305 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Paludibacteraceae
→
Genus
RF16
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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