Genome Details
Selected Rep_genome_ID: CGMR098611
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR098611 | 2,669,550 | 95.48% | 2.9% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR098611_CGC21 | CGCFAM_00012 | Yes | 3 | 1 | host glycan/beta-glucan |
| CGMR098611_CGC28 | CGCFAM_00012 | Yes | 4 | 2 | host glycan/beta-glucan |
| CGMR098611_CGC25 | CGCFAM_00094 | Yes | 5 | 3 | beta-mannan/fructan |
| CGMR098611_CGC32 | CGCFAM_00209 | Yes | 7 | 1 | |
| CGMR098611_CGC15 | CGCFAM_00495 | Yes | 4 | 1 | |
| CGMR098611_CGC16 | CGCFAM_01076 | Yes | 4 | 2 | |
| CGMR098611_CGC6 | CGCFAM_01120 | Yes | 8 | 2 | |
| CGMR098611_CGC2 | CGCFAM_01273 | Yes | 3 | 1 | |
| CGMR098611_CGC5 | CGCFAM_01335 | Yes | 6 | 1 | |
| CGMR098611_CGC12 | CGCFAM_02916 | Yes | 6 | 3 | |
| CGMR098611_CGC7 | CGCFAM_08175 | Yes | 4 | 3 | |
| CGMR098611_CGC26 | CGCFAM_08872 | Yes | 3 | 1 | |
| CGMR098611_CGC22 | CGCFAM_09045 | Yes | 10 | 2 |
Top CAZyme Families