Cluster: CGMR098611_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR098611
- CGC Family ID: CGCFAM_01120
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18340 | k141_18340_17 | 16533 | 19187 | - | 3.A.3.2.28 |
| pfam | k141_18340 | k141_18340_18 | 19425 | 20252 | - | NAD_synthase |
| pfam | k141_18340 | k141_18340_19 | 20266 | 21732 | - | NAPRTase | NAPRTase_N | NAPRTase_C |
| CAZyme | k141_18340 | k141_18340_20 | 21889 | 22623 | + | GT26 |
| TF | k141_18340 | k141_18340_21 | 22689 | 23390 | - | GntR |
| CAZyme | k141_18340 | k141_18340_22 | 23414 | 24550 | - | CE9 |
| pfam | k141_18340 | k141_18340_23 | 24631 | 25422 | - | NAD_binding_2 | F420_oxidored | P5CR_dimer |
| TC | k141_18340 | k141_18340_24 | 25806 | 26624 | + | 4.B.1.1.6 |
Gene ID: k141_18340_17
Type: TC
Location: 16533 - 19187 (-)
Type: TC
Location: 16533 - 19187 (-)
Gene ID: k141_18340_18
Type: pfam
Location: 19425 - 20252 (-)
Type: pfam
Location: 19425 - 20252 (-)
Gene ID: k141_18340_19
Type: pfam
Location: 20266 - 21732 (-)
Type: pfam
Location: 20266 - 21732 (-)
Gene ID: k141_18340_20
Type: CAZyme
Location: 21889 - 22623 (+)
Type: CAZyme
Location: 21889 - 22623 (+)
Gene ID: k141_18340_21
Type: TF
Location: 22689 - 23390 (-)
Type: TF
Location: 22689 - 23390 (-)
Gene ID: k141_18340_22
Type: CAZyme
Location: 23414 - 24550 (-)
Type: CAZyme
Location: 23414 - 24550 (-)
Gene ID: k141_18340_23
Type: pfam
Location: 24631 - 25422 (-)
Type: pfam
Location: 24631 - 25422 (-)
Gene ID: k141_18340_24
Type: TC
Location: 25806 - 26624 (+)
Type: TC
Location: 25806 - 26624 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.