Cluster: CGMR098611_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098611
- CGC Family ID: CGCFAM_00495
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_24824 | k141_24824_23 | 26055 | 27845 | - | 3.A.1.106.3 |
| TC | k141_24824 | k141_24824_24 | 27823 | 29595 | - | 3.A.1.106.3 |
| TF | k141_24824 | k141_24824_25 | 29726 | 30562 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_24824 | k141_24824_26 | 30748 | 32598 | + | GH20 |
Gene ID: k141_24824_23
Type: TC
Location: 26055 - 27845 (-)
Type: TC
Location: 26055 - 27845 (-)
Gene ID: k141_24824_24
Type: TC
Location: 27823 - 29595 (-)
Type: TC
Location: 27823 - 29595 (-)
Gene ID: k141_24824_25
Type: TF
Location: 29726 - 30562 (+)
Type: TF
Location: 29726 - 30562 (+)
Gene ID: k141_24824_26
Type: CAZyme
Location: 30748 - 32598 (+)
Type: CAZyme
Location: 30748 - 32598 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.