Genome Details
Selected Rep_genome_ID: CGMR082803
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella cibaria
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR007802 | 2,372,939 | 98.16% | 0.61% | China | Asia | CGMR |
| CGMR033283 | 2,183,462 | 97.25% | 0.82% | China | Asia | CGMR |
| CGMR082803 | 2,330,118 | 98.77% | 0.31% | China | Asia | CGMR |
| GH038_maxbin.014 | 2,466,403 | 97.55% | 0.66% | NA | Africa | H3AfricaPhase2 |
| SPMP45_bin.201 | 2,382,516 | 93.18% | 0% | Singapore | Asia | SPMP |
| SPMP94_bin.73 | 2,324,328 | 90.66% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR082803_CGC35 | CGCFAM_00020 | Yes | 5 | 1 | host glycan/beta-glucan |
| CGMR082803_CGC1 | CGCFAM_00066 | Yes | 5 | 2 | beta-mannan |
| CGMR082803_CGC18 | CGCFAM_00164 | Yes | 3 | 1 | |
| CGMR082803_CGC3 | CGCFAM_00178 | Yes | 6 | 4 | |
| CGMR082803_CGC19 | CGCFAM_00211 | Yes | 3 | 1 | |
| CGMR082803_CGC5 | CGCFAM_00503 | Yes | 9 | 3 | |
| CGMR082803_CGC22 | CGCFAM_00914 | Yes | 5 | 1 | |
| CGMR082803_CGC2 | CGCFAM_00994 | Yes | 8 | 3 | |
| CGMR082803_CGC11 | CGCFAM_01679 | Yes | 3 | 1 | |
| CGMR082803_CGC28 | CGCFAM_01822 | Yes | 5 | 1 | |
| CGMR082803_CGC14 | CGCFAM_03909 | Yes | 7 | 1 | |
| CGMR082803_CGC31 | CGCFAM_04338 | Yes | 8 | 2 | |
| CGMR082803_CGC32 | CGCFAM_04339 | Yes | 7 | 1 | |
| CGMR082803_CGC15 | CGCFAM_04340 | Yes | 6 | 3 | |
| CGMR082803_CGC34 | CGCFAM_05793 | Yes | 5 | 1 | |
| CGMR082803_CGC4 | CGCFAM_08819 | Yes | 9 | 3 |
Top CAZyme Families