Cluster: CGMR082803_CGC31
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR082803
- CGC Family ID: CGCFAM_04338
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_207228 | k141_207228_21 | 29865 | 30584 | + | 1.A.8.2.7 |
| peptidase | k141_207228 | k141_207228_22 | 30674 | 32488 | - | M03.007 |
| TF | k141_207228 | k141_207228_23 | 32528 | 33562 | - | CoiA |
| TC | k141_207228 | k141_207228_24 | 33664 | 35028 | - | 4.A.3.2.2 |
| CAZyme | k141_207228 | k141_207228_25 | 35095 | 36546 | - | GH1 |
| TC | k141_207228 | k141_207228_26 | 36552 | 36875 | - | 4.A.3.2.4 |
| TC | k141_207228 | k141_207228_27 | 36921 | 37238 | - | 4.A.3.2.4 |
| CAZyme | k141_207228 | k141_207228_28 | 37260 | 38717 | - | GH1 |
Gene ID: k141_207228_21
Type: TC
Location: 29865 - 30584 (+)
Type: TC
Location: 29865 - 30584 (+)
Gene ID: k141_207228_22
Type: peptidase
Location: 30674 - 32488 (-)
Type: peptidase
Location: 30674 - 32488 (-)
Gene ID: k141_207228_23
Type: TF
Location: 32528 - 33562 (-)
Type: TF
Location: 32528 - 33562 (-)
Gene ID: k141_207228_24
Type: TC
Location: 33664 - 35028 (-)
Type: TC
Location: 33664 - 35028 (-)
Gene ID: k141_207228_25
Type: CAZyme
Location: 35095 - 36546 (-)
Type: CAZyme
Location: 35095 - 36546 (-)
Gene ID: k141_207228_26
Type: TC
Location: 36552 - 36875 (-)
Type: TC
Location: 36552 - 36875 (-)
Gene ID: k141_207228_27
Type: TC
Location: 36921 - 37238 (-)
Type: TC
Location: 36921 - 37238 (-)
Gene ID: k141_207228_28
Type: CAZyme
Location: 37260 - 38717 (-)
Type: CAZyme
Location: 37260 - 38717 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella cibaria
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.