Cluster: CGMR082803_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082803
- CGC Family ID: CGCFAM_03909
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33270 | k141_33270_56 | 67774 | 69606 | - | 2.A.3.14.3 |
| pfam | k141_33270 | k141_33270_57 | 69792 | 71411 | - | Cpn60_TCP1 |
| pfam | k141_33270 | k141_33270_58 | 71462 | 71737 | - | Cpn10 |
| TC | k141_33270 | k141_33270_59 | 71904 | 73862 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | k141_33270 | k141_33270_60 | 73989 | 74312 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_33270 | k141_33270_61 | 74400 | 75101 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_33270 | k141_33270_62 | 75113 | 77047 | - | GT4 |
Gene ID: k141_33270_56
Type: TC
Location: 67774 - 69606 (-)
Type: TC
Location: 67774 - 69606 (-)
Gene ID: k141_33270_57
Type: pfam
Location: 69792 - 71411 (-)
Type: pfam
Location: 69792 - 71411 (-)
Gene ID: k141_33270_58
Type: pfam
Location: 71462 - 71737 (-)
Type: pfam
Location: 71462 - 71737 (-)
Gene ID: k141_33270_59
Type: TC
Location: 71904 - 73862 (-)
Type: TC
Location: 71904 - 73862 (-)
Gene ID: k141_33270_60
Type:
Location: 73989 - 74312 (-)
Type:
Location: 73989 - 74312 (-)
Gene ID: k141_33270_61
Type:
Location: 74400 - 75101 (-)
Type:
Location: 74400 - 75101 (-)
Gene ID: k141_33270_62
Type: CAZyme
Location: 75113 - 77047 (-)
Type: CAZyme
Location: 75113 - 77047 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella cibaria
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.