Genome Details
Selected Rep_genome_ID: CGMR061836
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Species
Pedobacter sp002399615
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR061836 | 3,367,749 | 93.93% | 3.59% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR061836_CGC16 | CGCFAM_00003 | Yes | 7 | 1 | |
| CGMR061836_CGC14 | CGCFAM_00055 | Yes | 3 | 2 | |
| CGMR061836_CGC3 | CGCFAM_00079 | Yes | 3 | 1 | pectin |
| CGMR061836_CGC13 | CGCFAM_00189 | Yes | 4 | 1 | |
| CGMR061836_CGC11 | CGCFAM_00355 | Yes | 3 | 1 | |
| CGMR061836_CGC8 | CGCFAM_00360 | Yes | 7 | 2 | host glycan |
| CGMR061836_CGC23 | CGCFAM_01093 | Yes | 5 | 1 | |
| CGMR061836_CGC18 | CGCFAM_05554 | Yes | 3 | 1 |
Top CAZyme Families