Cluster: CGMR061836_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061836
- CGC Family ID: CGCFAM_01093
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_161325 | k141_161325_1 | 2 | 1153 | - | 9.B.157.1.1 |
| NULL(UNKNOWN) | k141_161325 | k141_161325_2 | 1184 | 2284 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_161325 | k141_161325_3 | 2277 | 3629 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| CAZyme | k141_161325 | k141_161325_4 | 3707 | 4810 | - | GT28 |
| TC | k141_161325 | k141_161325_5 | 4917 | 6098 | - | 2.A.103.1.3 |
Gene ID: k141_161325_1
Type: TC
Location: 2 - 1153 (-)
Type: TC
Location: 2 - 1153 (-)
Gene ID: k141_161325_2
Type:
Location: 1184 - 2284 (-)
Type:
Location: 1184 - 2284 (-)
Gene ID: k141_161325_3
Type: pfam
Location: 2277 - 3629 (-)
Type: pfam
Location: 2277 - 3629 (-)
Gene ID: k141_161325_4
Type: CAZyme
Location: 3707 - 4810 (-)
Type: CAZyme
Location: 3707 - 4810 (-)
Gene ID: k141_161325_5
Type: TC
Location: 4917 - 6098 (-)
Type: TC
Location: 4917 - 6098 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Species
Pedobacter sp002399615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.