Genome Details
Selected Rep_genome_ID: CGMR059208
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp910587675
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR059208 | 2,164,101 | 96.63% | 0.48% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR059208_CGC25 | CGCFAM_00003 | Yes | 7 | 3 | |
| CGMR059208_CGC16 | CGCFAM_00030 | Yes | 3 | 1 | |
| CGMR059208_CGC8 | CGCFAM_00183 | Yes | 4 | 1 | pectin/host glycan |
| CGMR059208_CGC4 | CGCFAM_00511 | Yes | 8 | 1 | |
| CGMR059208_CGC24 | CGCFAM_00524 | Yes | 7 | 1 | |
| CGMR059208_CGC11 | CGCFAM_01241 | Yes | 5 | 2 | host glycan |
| CGMR059208_CGC2 | CGCFAM_04388 | Yes | 4 | 2 | |
| CGMR059208_CGC13 | CGCFAM_04390 | Yes | 6 | 1 | |
| CGMR059208_CGC1 | CGCFAM_06479 | Yes | 3 | 1 | |
| CGMR059208_CGC7 | CGCFAM_08426 | Yes | 13 | 1 |
Top CAZyme Families