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Cluster: CGMR059208_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_315464 k141_315464_38 40117 41241 + GT4
pfam k141_315464 k141_315464_39 41306 42187 + GTP_EFTU | MMR_HSR1 | FeoB_N | KH_2 | PduV-EutP
STP k141_315464 k141_315464_40 42290 44299 + TPR_1 | TPR_1 | TPR_1 | TPR_1 | TPR_1
TC k141_315464 k141_315464_41 44328 45680 + 2.A.1.53.5
pfam k141_315464 k141_315464_42 46137 46802 + Ion_trans_2
peptidase k141_315464 k141_315464_43 46881 48716 + S15.UNW
TC k141_315464 k141_315464_44 48910 50790 - 3.B.1.1.1
TC k141_315464 k141_315464_45 50928 52388 + 2.A.21.5.1
Gene ID: k141_315464_38
Type: CAZyme
Location: 40117 - 41241 (+)
Gene ID: k141_315464_39
Type: pfam
Location: 41306 - 42187 (+)
Gene ID: k141_315464_40
Type: STP
Location: 42290 - 44299 (+)
Gene ID: k141_315464_41
Type: TC
Location: 44328 - 45680 (+)
Gene ID: k141_315464_42
Type: pfam
Location: 46137 - 46802 (+)
Gene ID: k141_315464_43
Type: peptidase
Location: 46881 - 48716 (+)
Gene ID: k141_315464_44
Type: TC
Location: 48910 - 50790 (-)
Gene ID: k141_315464_45
Type: TC
Location: 50928 - 52388 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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