Cluster: CGMR059208_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR059208
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_212419 | k141_212419_23 | 27173 | 29623 | - | GH18 |
| pfam | k141_212419 | k141_212419_24 | 29749 | 30195 | - | PepSY_like |
| CAZyme | k141_212419 | k141_212419_25 | 30302 | 31864 | - | GT83 |
| TC | k141_212419 | k141_212419_26 | 31854 | 32477 | - | 2.A.123.4.1 |
| CAZyme | k141_212419 | k141_212419_27 | 32484 | 33215 | - | GT2 |
| pfam | k141_212419 | k141_212419_28 | 33230 | 34252 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| TC | k141_212419 | k141_212419_29 | 34428 | 35657 | - | 2.A.119.1.2 |
Gene ID: k141_212419_23
Type: CAZyme
Location: 27173 - 29623 (-)
Type: CAZyme
Location: 27173 - 29623 (-)
Gene ID: k141_212419_24
Type: pfam
Location: 29749 - 30195 (-)
Type: pfam
Location: 29749 - 30195 (-)
Gene ID: k141_212419_25
Type: CAZyme
Location: 30302 - 31864 (-)
Type: CAZyme
Location: 30302 - 31864 (-)
Gene ID: k141_212419_26
Type: TC
Location: 31854 - 32477 (-)
Type: TC
Location: 31854 - 32477 (-)
Gene ID: k141_212419_27
Type: CAZyme
Location: 32484 - 33215 (-)
Type: CAZyme
Location: 32484 - 33215 (-)
Gene ID: k141_212419_28
Type: pfam
Location: 33230 - 34252 (-)
Type: pfam
Location: 33230 - 34252 (-)
Gene ID: k141_212419_29
Type: TC
Location: 34428 - 35657 (-)
Type: TC
Location: 34428 - 35657 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp910587675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.