Genome Details
Selected Rep_genome_ID: CGMR006612
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900550375
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR006612 | 2,667,916 | 99.57% | 0.48% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR006612_CGC14 | CGCFAM_00001 | Yes | 7 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR006612_CGC6 | CGCFAM_00062 | Yes | 7 | 3 | beta-glucan |
| CGMR006612_CGC4 | CGCFAM_01875 | Yes | 4 | 2 | |
| CGMR006612_CGC15 | CGCFAM_05352 | Yes | 7 | 3 | |
| CGMR006612_CGC9 | CGCFAM_08145 | Yes | 7 | 1 | |
| CGMR006612_CGC10 | CGCFAM_08146 | Yes | 9 | 1 |
Top CAZyme Families