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Cluster: CGMR006612_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_92694 k141_92694_48 70208 71119 - GT2
STP k141_92694 k141_92694_49 71133 72038 - PALP
TC k141_92694 k141_92694_50 72547 73923 + 2.A.66.1.32
TC k141_92694 k141_92694_51 73935 74579 + 2.A.115.2.14
pfam k141_92694 k141_92694_52 74753 75775 - IU_nuc_hydro
TC k141_92694 k141_92694_53 76627 77988 - 2.A.1.4.6
NULL(UNKNOWN) k141_92694 k141_92694_54 78417 78656 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_92694 k141_92694_55 78709 79449 + HTH_DeoR
TC k141_92694 k141_92694_56 79541 81820 + 2.A.37.1.8
Gene ID: k141_92694_48
Type: CAZyme
Location: 70208 - 71119 (-)
Gene ID: k141_92694_49
Type: STP
Location: 71133 - 72038 (-)
Gene ID: k141_92694_50
Type: TC
Location: 72547 - 73923 (+)
Gene ID: k141_92694_51
Type: TC
Location: 73935 - 74579 (+)
Gene ID: k141_92694_52
Type: pfam
Location: 74753 - 75775 (-)
Gene ID: k141_92694_53
Type: TC
Location: 76627 - 77988 (-)
Gene ID: k141_92694_54
Type:
Location: 78417 - 78656 (-)
Gene ID: k141_92694_55
Type: TF
Location: 78709 - 79449 (+)
Gene ID: k141_92694_56
Type: TC
Location: 79541 - 81820 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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