Cluster: CGMR006612_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: beta-glucan
- Genome ID: CGMR006612
- CGC Family ID: CGCFAM_00062
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_138473 | k141_138473_151 | 169262 | 170581 | + | GH2 |
| pfam | k141_138473 | k141_138473_152 | 170867 | 172525 | - | DUF6377 |
| TC | k141_138473 | k141_138473_153 | 173018 | 176059 | + | 1.B.14.6.1 |
| pfam | k141_138473 | k141_138473_154 | 176083 | 177645 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_138473 | k141_138473_155 | 177673 | 179190 | + | GH30_3 |
| pfam | k141_138473 | k141_138473_156 | 179210 | 181252 | + | DUF5016 | DUF5125 | DUF5125 | DUF5121 | DUF5121 |
| CAZyme | k141_138473 | k141_138473_157 | 181322 | 183541 | + | GH3 |
Gene ID: k141_138473_151
Type: CAZyme
Location: 169262 - 170581 (+)
Type: CAZyme
Location: 169262 - 170581 (+)
Gene ID: k141_138473_152
Type: pfam
Location: 170867 - 172525 (-)
Type: pfam
Location: 170867 - 172525 (-)
Gene ID: k141_138473_153
Type: TC
Location: 173018 - 176059 (+)
Type: TC
Location: 173018 - 176059 (+)
Gene ID: k141_138473_154
Type: pfam
Location: 176083 - 177645 (+)
Type: pfam
Location: 176083 - 177645 (+)
Gene ID: k141_138473_155
Type: CAZyme
Location: 177673 - 179190 (+)
Type: CAZyme
Location: 177673 - 179190 (+)
Gene ID: k141_138473_156
Type: pfam
Location: 179210 - 181252 (+)
Type: pfam
Location: 179210 - 181252 (+)
Gene ID: k141_138473_157
Type: CAZyme
Location: 181322 - 183541 (+)
Type: CAZyme
Location: 181322 - 183541 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900550375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.