Genome Details
Selected Rep_genome_ID: CGMR005752
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp905214725
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR005752 | 2,572,945 | 96.63% | 0.48% | China | Asia | CGMR |
| MGYG000004756 | 2,379,647 | 93.7% | 0% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR005752_CGC16 | CGCFAM_00001 | Yes | 7 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR005752_CGC18 | CGCFAM_00001 | Yes | 3 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR005752_CGC7 | CGCFAM_00018 | Yes | 4 | 1 | |
| CGMR005752_CGC19 | CGCFAM_00065 | Yes | 4 | 2 | |
| CGMR005752_CGC2 | CGCFAM_00511 | Yes | 7 | 1 | |
| CGMR005752_CGC5 | CGCFAM_03339 | Yes | 4 | 2 | |
| CGMR005752_CGC15 | CGCFAM_03702 | Yes | 4 | 1 | |
| CGMR005752_CGC10 | CGCFAM_05352 | Yes | 8 | 3 | |
| CGMR005752_CGC11 | CGCFAM_07372 | Yes | 3 | 1 | |
| CGMR005752_CGC13 | CGCFAM_08145 | Yes | 11 | 1 | |
| CGMR005752_CGC14 | CGCFAM_08146 | Yes | 10 | 1 | |
| CGMR005752_CGC20 | CGCFAM_08147 | Yes | 5 | 2 | |
| CGMR005752_CGC9 | CGCFAM_08148 | Yes | 6 | 2 |
Top CAZyme Families