Cluster: CGMR005752_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR005752
- CGC Family ID: CGCFAM_00065
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_60897 | k141_60897_251 | 285799 | 286911 | - | GT4 |
| CAZyme | k141_60897 | k141_60897_252 | 286913 | 287899 | - | GT2 |
| pfam | k141_60897 | k141_60897_253 | 287896 | 289011 | - | Glyco_tran_WbsX |
| TC | k141_60897 | k141_60897_254 | 289228 | 289593 | + | 2.A.7.34.6 |
Gene ID: k141_60897_251
Type: CAZyme
Location: 285799 - 286911 (-)
Type: CAZyme
Location: 285799 - 286911 (-)
Gene ID: k141_60897_252
Type: CAZyme
Location: 286913 - 287899 (-)
Type: CAZyme
Location: 286913 - 287899 (-)
Gene ID: k141_60897_253
Type: pfam
Location: 287896 - 289011 (-)
Type: pfam
Location: 287896 - 289011 (-)
Gene ID: k141_60897_254
Type: TC
Location: 289228 - 289593 (+)
Type: TC
Location: 289228 - 289593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp905214725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_60897_251 | vegetarian > omnivore | 1.00721 | 0.01057 |
| k141_60897_251 | vegetarian > vegan | 1.04293 | 0.00455 |
| k141_60897_252 | vegetarian > vegan | 1.11706 | 0.00455 |