Cluster: CGMR005752_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR005752
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_187730 | k141_187730_58 | 64133 | 67126 | + | 1.B.14.6.1 |
| pfam | k141_187730 | k141_187730_59 | 67153 | 68853 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_187730 | k141_187730_60 | 68961 | 72077 | + | GH106 |
Gene ID: k141_187730_58
Type: TC
Location: 64133 - 67126 (+)
Type: TC
Location: 64133 - 67126 (+)
Gene ID: k141_187730_59
Type: pfam
Location: 67153 - 68853 (+)
Type: pfam
Location: 67153 - 68853 (+)
Gene ID: k141_187730_60
Type: CAZyme
Location: 68961 - 72077 (+)
Type: CAZyme
Location: 68961 - 72077 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp905214725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.