Genome Details
Selected Rep_genome_ID: B111.bin_19
Total Genomes Found: 15
Total Genomes Found: 15
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B111.bin_19 | 3,320,654 | 99.28% | 0.48% | China(Inner Mongolia) | Asia | IMGG |
| CGMR005540 | 3,393,006 | 99.28% | 0.48% | China | Asia | CGMR |
| GCF_021620835.1_ASM2162083v1_genomic | 3,416,485 | 98.06% | 0.99% | NA | Africa | H3AfricaPhase1 |
| GCF_021621225.1_ASM2162122v1_genomic | 3,369,510 | 98.8% | 0.48% | NA | Africa | H3AfricaPhase1 |
| GCF_021621505.1_ASM2162150v1_genomic | 3,179,645 | 96.1% | 0.48% | NA | Africa | H3AfricaPhase1 |
| Rep_620 | 3,263,232 | 98.6378% | 0.480769% | NA | NA | WIS |
| SPMP06_bin.9 | 3,337,314 | 98.08% | 0.48% | Singapore | Asia | SPMP |
| SPMP100_bin.38 | 3,217,625 | 95.91% | 0.48% | Singapore | Asia | SPMP |
| SPMP16_bin.35 | 3,015,973 | 90.88% | 0.72% | Singapore | Asia | SPMP |
| SPMP20_bin.23 | 3,027,669 | 94.95% | 0.16% | Singapore | Asia | SPMP |
| SPMP27_bin.38 | 3,127,644 | 96.88% | 0.96% | Singapore | Asia | SPMP |
| SPMP77_bin.12 | 3,398,715 | 97.44% | 0.48% | Singapore | Asia | SPMP |
| SPMP89_bin.69 | 3,002,662 | 94.68% | 0.48% | Singapore | Asia | SPMP |
| SPMP95_bin.23 | 3,272,360 | 97.36% | 0.72% | Singapore | Asia | SPMP |
| SW184_maxbin.006 | 2,996,891 | 99.28% | 0.48% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| B111.bin_19_CGC2 | CGCFAM_04860 | Yes | 9 | 3 | |
| B111.bin_19_CGC13 | CGCFAM_06440 | Yes | 10 | 2 | |
| B111.bin_19_CGC23 | CGCFAM_07375 | Yes | 4 | 1 | |
| B111.bin_19_CGC3 | CGCFAM_07376 | Yes | 3 | 2 | |
| B111.bin_19_CGC36 | CGCFAM_07378 | Yes | 6 | 1 |
Top CAZyme Families