Cluster: B111.bin_19_CGC13
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_06440
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_92 | B111_contig_92_616 | 695312 | 696304 | + | 1.A.13.4.1 |
| pfam | B111_contig_92 | B111_contig_92_617 | 696368 | 697492 | + | VWA | BatA | VWA_2 |
| CAZyme | B111_contig_92 | B111_contig_92_618 | 697925 | 699985 | - | GH20 |
| pfam | B111_contig_92 | B111_contig_92_619 | 700304 | 701461 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | B111_contig_92 | B111_contig_92_620 | 701480 | 703387 | - | GH18 |
| TC | B111_contig_92 | B111_contig_92_621 | 703411 | 704967 | - | 8.A.46.2.2 |
| TC | B111_contig_92 | B111_contig_92_622 | 704980 | 708342 | - | 1.B.14.6.13 |
| STP | B111_contig_92 | B111_contig_92_623 | 708468 | 709469 | - | FecR |
| TF | B111_contig_92 | B111_contig_92_624 | 709552 | 710148 | - | GerE |
| TC | B111_contig_92 | B111_contig_92_625 | 711089 | 712564 | + | 2.A.1.3.18 |
Gene ID: B111_contig_92_616
Type: TC
Location: 695312 - 696304 (+)
Type: TC
Location: 695312 - 696304 (+)
Gene ID: B111_contig_92_617
Type: pfam
Location: 696368 - 697492 (+)
Type: pfam
Location: 696368 - 697492 (+)
Gene ID: B111_contig_92_618
Type: CAZyme
Location: 697925 - 699985 (-)
Type: CAZyme
Location: 697925 - 699985 (-)
Gene ID: B111_contig_92_619
Type: pfam
Location: 700304 - 701461 (-)
Type: pfam
Location: 700304 - 701461 (-)
Gene ID: B111_contig_92_620
Type: CAZyme
Location: 701480 - 703387 (-)
Type: CAZyme
Location: 701480 - 703387 (-)
Gene ID: B111_contig_92_621
Type: TC
Location: 703411 - 704967 (-)
Type: TC
Location: 703411 - 704967 (-)
Gene ID: B111_contig_92_622
Type: TC
Location: 704980 - 708342 (-)
Type: TC
Location: 704980 - 708342 (-)
Gene ID: B111_contig_92_623
Type: STP
Location: 708468 - 709469 (-)
Type: STP
Location: 708468 - 709469 (-)
Gene ID: B111_contig_92_624
Type: TF
Location: 709552 - 710148 (-)
Type: TF
Location: 709552 - 710148 (-)
Gene ID: B111_contig_92_625
Type: TC
Location: 711089 - 712564 (+)
Type: TC
Location: 711089 - 712564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B111_contig_92_621 | omnivore > vegan | 1.01119 | 0.04414 |