Genome Details
Selected Rep_genome_ID: AG446_57_sub
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp900539195
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG446_57_sub | 2,710,784 | 98.99% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR004527 | 2,515,427 | 97.32% | 0.67% | China | Asia | CGMR |
| CGMR007932 | 2,346,959 | 96.53% | 0% | China | Asia | CGMR |
| HRGMv2_2670 | 2,581,253 | 98.32% | 0% | South Korea | Asia | HRGM |
| MGYG000003844 | 2,672,388 | 98.32% | 0% | United States | North America | UHGG |
| Rep_3456 | 2,817,853 | 98.3222% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG446_57_sub_CGC17 | CGCFAM_00011 | Yes | 8 | 3 | |
| AG446_57_sub_CGC3 | CGCFAM_00057 | Yes | 8 | 1 | |
| AG446_57_sub_CGC2 | CGCFAM_00074 | Yes | 5 | 2 | |
| AG446_57_sub_CGC10 | CGCFAM_00271 | Yes | 3 | 2 | |
| AG446_57_sub_CGC22 | CGCFAM_00384 | Yes | 4 | 1 | |
| AG446_57_sub_CGC5 | CGCFAM_00766 | Yes | 4 | 1 | |
| AG446_57_sub_CGC12 | CGCFAM_01662 | Yes | 3 | 2 | |
| AG446_57_sub_CGC11 | CGCFAM_01880 | Yes | 5 | 2 | |
| AG446_57_sub_CGC21 | CGCFAM_02019 | Yes | 5 | 2 | |
| AG446_57_sub_CGC26 | CGCFAM_02041 | Yes | 4 | 1 | |
| AG446_57_sub_CGC20 | CGCFAM_02560 | Yes | 3 | 1 | |
| AG446_57_sub_CGC23 | CGCFAM_03039 | Yes | 6 | 1 | |
| AG446_57_sub_CGC15 | CGCFAM_03348 | Yes | 4 | 1 | |
| AG446_57_sub_CGC27 | CGCFAM_04512 | Yes | 5 | 1 | |
| AG446_57_sub_CGC19 | CGCFAM_04791 | Yes | 8 | 2 | |
| AG446_57_sub_CGC4 | CGCFAM_04793 | Yes | 7 | 1 | |
| AG446_57_sub_CGC6 | CGCFAM_04794 | Yes | 6 | 1 | |
| AG446_57_sub_CGC29 | CGCFAM_06673 | Yes | 4 | 1 | |
| AG446_57_sub_CGC16 | CGCFAM_06982 | Yes | 3 | 1 | |
| AG446_57_sub_CGC24 | CGCFAM_07280 | Yes | 6 | 2 | |
| AG446_57_sub_CGC25 | CGCFAM_07281 | Yes | 5 | 1 |
Top CAZyme Families