Cluster: AG446_57_sub_CGC19
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: AG446_57_sub
- CGC Family ID: CGCFAM_04791
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_34888 | k141_34888_5 | 2311 | 3492 | - | GH5_4 |
| TF | k141_34888 | k141_34888_6 | 3511 | 4305 | - | HTH_AraC |
| CAZyme | k141_34888 | k141_34888_7 | 4331 | 5683 | - | GH43_35 |
| pfam | k141_34888 | k141_34888_8 | 6023 | 6433 | + | Pep_deformylase |
| pfam | k141_34888 | k141_34888_9 | 6517 | 8844 | - | fn3 | fn3 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 |
| TC | k141_34888 | k141_34888_10 | 9060 | 10106 | - | 3.A.1.17.3 |
| TC | k141_34888 | k141_34888_11 | 10108 | 10851 | - | 3.A.1.17.13 |
| TC | k141_34888 | k141_34888_12 | 10848 | 11624 | - | 3.A.1.17.8 |
Gene ID: k141_34888_5
Type: CAZyme
Location: 2311 - 3492 (-)
Type: CAZyme
Location: 2311 - 3492 (-)
Gene ID: k141_34888_6
Type: TF
Location: 3511 - 4305 (-)
Type: TF
Location: 3511 - 4305 (-)
Gene ID: k141_34888_7
Type: CAZyme
Location: 4331 - 5683 (-)
Type: CAZyme
Location: 4331 - 5683 (-)
Gene ID: k141_34888_8
Type: pfam
Location: 6023 - 6433 (+)
Type: pfam
Location: 6023 - 6433 (+)
Gene ID: k141_34888_9
Type: pfam
Location: 6517 - 8844 (-)
Type: pfam
Location: 6517 - 8844 (-)
Gene ID: k141_34888_10
Type: TC
Location: 9060 - 10106 (-)
Type: TC
Location: 9060 - 10106 (-)
Gene ID: k141_34888_11
Type: TC
Location: 10108 - 10851 (-)
Type: TC
Location: 10108 - 10851 (-)
Gene ID: k141_34888_12
Type: TC
Location: 10848 - 11624 (-)
Type: TC
Location: 10848 - 11624 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp900539195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.