Cluster: AG446_57_sub_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: AG446_57_sub
- CGC Family ID: CGCFAM_07280
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5582 | k141_5582_7 | 4976 | 6055 | - | 2.A.98.1.4 |
| TF | k141_5582 | k141_5582_8 | 6162 | 7019 | + | HTH_1 |
| TF | k141_5582 | k141_5582_9 | 7064 | 7885 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_5582 | k141_5582_10 | 8035 | 10764 | + | GH59 |
| CAZyme | k141_5582 | k141_5582_11 | 10989 | 12047 | + | GH35 |
| TC | k141_5582 | k141_5582_12 | 11999 | 12520 | + | 9.B.207.2.1 |
Gene ID: k141_5582_7
Type: TC
Location: 4976 - 6055 (-)
Type: TC
Location: 4976 - 6055 (-)
Gene ID: k141_5582_8
Type: TF
Location: 6162 - 7019 (+)
Type: TF
Location: 6162 - 7019 (+)
Gene ID: k141_5582_9
Type: TF
Location: 7064 - 7885 (+)
Type: TF
Location: 7064 - 7885 (+)
Gene ID: k141_5582_10
Type: CAZyme
Location: 8035 - 10764 (+)
Type: CAZyme
Location: 8035 - 10764 (+)
Gene ID: k141_5582_11
Type: CAZyme
Location: 10989 - 12047 (+)
Type: CAZyme
Location: 10989 - 12047 (+)
Gene ID: k141_5582_12
Type: TC
Location: 11999 - 12520 (+)
Type: TC
Location: 11999 - 12520 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp900539195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.