Genome Details
Selected Rep_genome_ID: AG427_bin.19
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG427_bin.19 | 1,875,343 | 96.2% | 0.93% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG427_bin.19_CGC7 | CGCFAM_00014 | Yes | 3 | 1 | host glycan |
| AG427_bin.19_CGC22 | CGCFAM_00020 | Yes | 8 | 1 | host glycan/beta-glucan |
| AG427_bin.19_CGC1 | CGCFAM_00027 | Yes | 4 | 1 | |
| AG427_bin.19_CGC6 | CGCFAM_00090 | Yes | 4 | 2 | |
| AG427_bin.19_CGC10 | CGCFAM_00102 | Yes | 6 | 1 | |
| AG427_bin.19_CGC26 | CGCFAM_00336 | Yes | 9 | 4 | alpha-glucan |
| AG427_bin.19_CGC13 | CGCFAM_00403 | Yes | 12 | 3 | |
| AG427_bin.19_CGC3 | CGCFAM_00885 | Yes | 5 | 2 | |
| AG427_bin.19_CGC11 | CGCFAM_01025 | Yes | 11 | 4 | |
| AG427_bin.19_CGC18 | CGCFAM_01180 | Yes | 6 | 1 | |
| AG427_bin.19_CGC19 | CGCFAM_01385 | Yes | 6 | 1 | |
| AG427_bin.19_CGC16 | CGCFAM_03336 | Yes | 12 | 2 | |
| AG427_bin.19_CGC14 | CGCFAM_04770 | Yes | 7 | 1 | |
| AG427_bin.19_CGC15 | CGCFAM_04771 | Yes | 4 | 2 | |
| AG427_bin.19_CGC17 | CGCFAM_04773 | Yes | 7 | 1 | |
| AG427_bin.19_CGC21 | CGCFAM_04774 | Yes | 6 | 3 | |
| AG427_bin.19_CGC23 | CGCFAM_04775 | Yes | 6 | 1 | |
| AG427_bin.19_CGC27 | CGCFAM_04776 | Yes | 9 | 3 | |
| AG427_bin.19_CGC4 | CGCFAM_04777 | Yes | 20 | 2 | |
| AG427_bin.19_CGC12 | CGCFAM_07261 | Yes | 5 | 1 | |
| AG427_bin.19_CGC5 | CGCFAM_07264 | Yes | 6 | 2 |
Top CAZyme Families