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Cluster: AG427_bin.19_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12649 k141_12649_7 5312 7240 - 4.A.1.2.2
TF k141_12649 k141_12649_8 7434 8159 + GntR
CAZyme k141_12649 k141_12649_9 8196 9854 + GH13_29
pfam k141_12649 k141_12649_10 9957 10784 + PDDEXK_2
NULL(UNKNOWN) k141_12649 k141_12649_11 10835 11224 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_12649 k141_12649_12 11413 12063 - 3.A.1.3.10
TC k141_12649 k141_12649_13 12077 12715 - 3.A.1.3.16
TC k141_12649 k141_12649_14 12712 13536 - 3.A.1.3.16
TC k141_12649 k141_12649_15 13551 14288 - 3.A.1.3.26
TC k141_12649 k141_12649_16 14730 15551 - 3.A.1.3.16
TC k141_12649 k141_12649_17 15603 17372 - 3.A.1.135.8
TC k141_12649 k141_12649_18 17365 19098 - 3.A.1.135.8
TF k141_12649 k141_12649_19 19099 19539 - 0040517
pfam k141_12649 k141_12649_20 19627 20478 - LCAT | DUF915
TC k141_12649 k141_12649_21 20581 21813 - 2.A.1.15.9
peptidase k141_12649 k141_12649_22 21904 23310 - C69.001
TC k141_12649 k141_12649_23 23478 24971 - 2.A.17.1.6
CAZyme k141_12649 k141_12649_24 25118 27151 - GH42
pfam k141_12649 k141_12649_25 27393 28679 + PS_Dcarbxylase | PSDC
TC k141_12649 k141_12649_26 28714 30147 + 2.A.3.2.7
Gene ID: k141_12649_7
Type: TC
Location: 5312 - 7240 (-)
Gene ID: k141_12649_8
Type: TF
Location: 7434 - 8159 (+)
Gene ID: k141_12649_9
Type: CAZyme
Location: 8196 - 9854 (+)
Gene ID: k141_12649_10
Type: pfam
Location: 9957 - 10784 (+)
Gene ID: k141_12649_11
Type:
Location: 10835 - 11224 (-)
Gene ID: k141_12649_12
Type: TC
Location: 11413 - 12063 (-)
Gene ID: k141_12649_13
Type: TC
Location: 12077 - 12715 (-)
Gene ID: k141_12649_14
Type: TC
Location: 12712 - 13536 (-)
Gene ID: k141_12649_15
Type: TC
Location: 13551 - 14288 (-)
Gene ID: k141_12649_16
Type: TC
Location: 14730 - 15551 (-)
Gene ID: k141_12649_17
Type: TC
Location: 15603 - 17372 (-)
Gene ID: k141_12649_18
Type: TC
Location: 17365 - 19098 (-)
Gene ID: k141_12649_19
Type: TF
Location: 19099 - 19539 (-)
Gene ID: k141_12649_20
Type: pfam
Location: 19627 - 20478 (-)
Gene ID: k141_12649_21
Type: TC
Location: 20581 - 21813 (-)
Gene ID: k141_12649_22
Type: peptidase
Location: 21904 - 23310 (-)
Gene ID: k141_12649_23
Type: TC
Location: 23478 - 24971 (-)
Gene ID: k141_12649_24
Type: CAZyme
Location: 25118 - 27151 (-)
Gene ID: k141_12649_25
Type: pfam
Location: 27393 - 28679 (+)
Gene ID: k141_12649_26
Type: TC
Location: 28714 - 30147 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Lactobacillus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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