Cluster: AG427_bin.19_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: AG427_bin.19
- CGC Family ID: CGCFAM_00403
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_5468 | k141_5468_12 | 10563 | 11942 | + | GH1 |
| TC | k141_5468 | k141_5468_13 | 11942 | 13372 | + | 4.A.3.2.2 |
| TC | k141_5468 | k141_5468_14 | 13520 | 13843 | + | 4.A.3.2.4 |
| NULL(UNKNOWN) | k141_5468 | k141_5468_15 | 13844 | 14092 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_5468 | k141_5468_16 | 14181 | 14507 | + | 4.A.3.2.4 |
| TF | k141_5468 | k141_5468_17 | 14507 | 15232 | + | GntR |
| CAZyme | k141_5468 | k141_5468_18 | 15300 | 16793 | + | GH1 |
| pfam | k141_5468 | k141_5468_19 | 16863 | 17270 | + | DUF3284 |
| TF | k141_5468 | k141_5468_20 | 17323 | 18021 | - | GntR |
| TC | k141_5468 | k141_5468_21 | 18097 | 19449 | - | 4.A.3.2.2 |
| NULL(UNKNOWN) | k141_5468 | k141_5468_22 | 19472 | 19969 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_5468 | k141_5468_23 | 20168 | 21616 | + | GH1 |
Gene ID: k141_5468_12
Type: CAZyme
Location: 10563 - 11942 (+)
Type: CAZyme
Location: 10563 - 11942 (+)
Gene ID: k141_5468_13
Type: TC
Location: 11942 - 13372 (+)
Type: TC
Location: 11942 - 13372 (+)
Gene ID: k141_5468_14
Type: TC
Location: 13520 - 13843 (+)
Type: TC
Location: 13520 - 13843 (+)
Gene ID: k141_5468_15
Type:
Location: 13844 - 14092 (+)
Type:
Location: 13844 - 14092 (+)
Gene ID: k141_5468_16
Type: TC
Location: 14181 - 14507 (+)
Type: TC
Location: 14181 - 14507 (+)
Gene ID: k141_5468_17
Type: TF
Location: 14507 - 15232 (+)
Type: TF
Location: 14507 - 15232 (+)
Gene ID: k141_5468_18
Type: CAZyme
Location: 15300 - 16793 (+)
Type: CAZyme
Location: 15300 - 16793 (+)
Gene ID: k141_5468_19
Type: pfam
Location: 16863 - 17270 (+)
Type: pfam
Location: 16863 - 17270 (+)
Gene ID: k141_5468_20
Type: TF
Location: 17323 - 18021 (-)
Type: TF
Location: 17323 - 18021 (-)
Gene ID: k141_5468_21
Type: TC
Location: 18097 - 19449 (-)
Type: TC
Location: 18097 - 19449 (-)
Gene ID: k141_5468_22
Type:
Location: 19472 - 19969 (-)
Type:
Location: 19472 - 19969 (-)
Gene ID: k141_5468_23
Type: CAZyme
Location: 20168 - 21616 (+)
Type: CAZyme
Location: 20168 - 21616 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.