Genome Details
Selected Rep_genome_ID: AG400_49
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides gordonii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG400_49 | 6,542,195 | 99.62% | 0.9% | NA | Africa | H3AfricaPhase2 |
| CGMR016059 | 5,790,856 | 96.54% | 0.38% | China | Asia | CGMR |
| CGMR052860 | 5,632,758 | 93.3% | 3.08% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG400_49_CGC90 | CGCFAM_03322 | Yes | 4 | 1 | |
| AG400_49_CGC77 | CGCFAM_04523 | Yes | 5 | 1 | |
| AG400_49_CGC1 | CGCFAM_04733 | Yes | 7 | 2 | |
| AG400_49_CGC22 | CGCFAM_04736 | Yes | 11 | 4 | |
| AG400_49_CGC56 | CGCFAM_04738 | Yes | 12 | 4 | |
| AG400_49_CGC59 | CGCFAM_04739 | Yes | 9 | 1 | |
| AG400_49_CGC60 | CGCFAM_04740 | Yes | 14 | 7 | |
| AG400_49_CGC63 | CGCFAM_04741 | Yes | 4 | 1 | |
| AG400_49_CGC81 | CGCFAM_04743 | Yes | 4 | 2 | |
| AG400_49_CGC9 | CGCFAM_04744 | Yes | 8 | 1 | |
| AG400_49_CGC91 | CGCFAM_04745 | Yes | 5 | 1 | |
| AG400_49_CGC18 | CGCFAM_06426 | Yes | 8 | 3 | |
| AG400_49_CGC113 | CGCFAM_07218 | Yes | 6 | 1 | |
| AG400_49_CGC114 | CGCFAM_07219 | Yes | 10 | 4 | |
| AG400_49_CGC117 | CGCFAM_07221 | Yes | 5 | 2 | |
| AG400_49_CGC13 | CGCFAM_07224 | Yes | 5 | 2 | |
| AG400_49_CGC23 | CGCFAM_07225 | Yes | 4 | 2 | |
| AG400_49_CGC3 | CGCFAM_07226 | Yes | 3 | 1 | |
| AG400_49_CGC50 | CGCFAM_07228 | Yes | 6 | 2 | |
| AG400_49_CGC51 | CGCFAM_07229 | Yes | 4 | 1 | |
| AG400_49_CGC64 | CGCFAM_07231 | Yes | 5 | 3 | |
| AG400_49_CGC7 | CGCFAM_07232 | Yes | 3 | 1 | |
| AG400_49_CGC74 | CGCFAM_07233 | Yes | 6 | 2 | |
| AG400_49_CGC83 | CGCFAM_07234 | Yes | 11 | 2 |
Top CAZyme Families