Cluster: AG400_49_CGC60
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: AG400_49
- CGC Family ID: CGCFAM_04740
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_285286 | k141_285286_174 | 270704 | 274138 | + | 1.B.14.6.1 |
| pfam | k141_285286 | k141_285286_175 | 274157 | 275869 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| CAZyme | k141_285286 | k141_285286_176 | 275926 | 278076 | + | GH31_14 |
| CAZyme | k141_285286 | k141_285286_177 | 278250 | 280211 | + | GH97 |
| CAZyme | k141_285286 | k141_285286_178 | 280227 | 282062 | + | GH29 |
| CAZyme | k141_285286 | k141_285286_179 | 282178 | 283317 | + | GH95 |
| CAZyme | k141_285286 | k141_285286_180 | 283351 | 284526 | + | GH95 |
| CAZyme | k141_285286 | k141_285286_181 | 284556 | 287312 | + | GH92 |
| CAZyme | k141_285286 | k141_285286_182 | 287395 | 290226 | + | CBM51 |
| NULL(UNKNOWN) | k141_285286 | k141_285286_183 | 290160 | 290375 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_285286 | k141_285286_184 | 290795 | 293953 | + | 1.B.14.6.1 |
| pfam | k141_285286 | k141_285286_185 | 293973 | 295511 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| pfam | k141_285286 | k141_285286_186 | 295595 | 297082 | + | Arylsulfotrans | Arylsulfotran_2 |
| TC | k141_285286 | k141_285286_187 | 297084 | 298262 | + | 2.A.51.1.3 |
Gene ID: k141_285286_174
Type: TC
Location: 270704 - 274138 (+)
Type: TC
Location: 270704 - 274138 (+)
Gene ID: k141_285286_175
Type: pfam
Location: 274157 - 275869 (+)
Type: pfam
Location: 274157 - 275869 (+)
Gene ID: k141_285286_176
Type: CAZyme
Location: 275926 - 278076 (+)
Type: CAZyme
Location: 275926 - 278076 (+)
Gene ID: k141_285286_177
Type: CAZyme
Location: 278250 - 280211 (+)
Type: CAZyme
Location: 278250 - 280211 (+)
Gene ID: k141_285286_178
Type: CAZyme
Location: 280227 - 282062 (+)
Type: CAZyme
Location: 280227 - 282062 (+)
Gene ID: k141_285286_179
Type: CAZyme
Location: 282178 - 283317 (+)
Type: CAZyme
Location: 282178 - 283317 (+)
Gene ID: k141_285286_180
Type: CAZyme
Location: 283351 - 284526 (+)
Type: CAZyme
Location: 283351 - 284526 (+)
Gene ID: k141_285286_181
Type: CAZyme
Location: 284556 - 287312 (+)
Type: CAZyme
Location: 284556 - 287312 (+)
Gene ID: k141_285286_182
Type: CAZyme
Location: 287395 - 290226 (+)
Type: CAZyme
Location: 287395 - 290226 (+)
Gene ID: k141_285286_183
Type:
Location: 290160 - 290375 (-)
Type:
Location: 290160 - 290375 (-)
Gene ID: k141_285286_184
Type: TC
Location: 290795 - 293953 (+)
Type: TC
Location: 290795 - 293953 (+)
Gene ID: k141_285286_185
Type: pfam
Location: 293973 - 295511 (+)
Type: pfam
Location: 293973 - 295511 (+)
Gene ID: k141_285286_186
Type: pfam
Location: 295595 - 297082 (+)
Type: pfam
Location: 295595 - 297082 (+)
Gene ID: k141_285286_187
Type: TC
Location: 297084 - 298262 (+)
Type: TC
Location: 297084 - 298262 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides gordonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_285286_184 | vegetarian > omnivore | 2.01023 | 0.00290 |
| k141_285286_185 | vegan > omnivore | 2.03453 | 0.04712 |
| k141_285286_185 | vegetarian > omnivore | 2.07372 | 0.00290 |
| k141_285286_186 | vegan > omnivore | 2.33303 | 0.01783 |
| k141_285286_186 | vegetarian > omnivore | 2.35929 | 0.00290 |