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Cluster: AG400_49_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_285286 k141_285286_141 217363 220788 + 1.B.14.6.1
TC k141_285286 k141_285286_142 220815 222617 + 8.A.46.1.5
TC k141_285286 k141_285286_143 222724 224292 - 3.D.10.1.4
pfam k141_285286 k141_285286_144 224496 225191 + DUF3108_like
TF k141_285286 k141_285286_145 225614 229564 - HTH_AraC
TC k141_285286 k141_285286_146 229844 232858 + 1.B.14.6.1
pfam k141_285286 k141_285286_147 232871 234556 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_285286 k141_285286_148 234614 235324 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_285286 k141_285286_149 235363 237642 + GH163
Gene ID: k141_285286_141
Type: TC
Location: 217363 - 220788 (+)
Gene ID: k141_285286_142
Type: TC
Location: 220815 - 222617 (+)
Gene ID: k141_285286_143
Type: TC
Location: 222724 - 224292 (-)
Gene ID: k141_285286_144
Type: pfam
Location: 224496 - 225191 (+)
Gene ID: k141_285286_145
Type: TF
Location: 225614 - 229564 (-)
Gene ID: k141_285286_146
Type: TC
Location: 229844 - 232858 (+)
Gene ID: k141_285286_147
Type: pfam
Location: 232871 - 234556 (+)
Gene ID: k141_285286_148
Type:
Location: 234614 - 235324 (+)
Gene ID: k141_285286_149
Type: CAZyme
Location: 235363 - 237642 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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