Genome Details
Selected Rep_genome_ID: AG148_bin.48
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter caccavium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG148_bin.48 | 3,077,030 | 92.98% | 0.58% | NA | Africa | H3AfricaPhase2 |
| CGMR022654 | 2,803,344 | 90.8% | 1.08% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG148_bin.48_CGC13 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| AG148_bin.48_CGC4 | CGCFAM_00056 | Yes | 6 | 1 | |
| AG148_bin.48_CGC30 | CGCFAM_00074 | Yes | 8 | 4 | |
| AG148_bin.48_CGC5 | CGCFAM_00090 | Yes | 3 | 2 | |
| AG148_bin.48_CGC16 | CGCFAM_00093 | Yes | 4 | 2 | |
| AG148_bin.48_CGC6 | CGCFAM_00097 | Yes | 7 | 1 | |
| AG148_bin.48_CGC1 | CGCFAM_00161 | Yes | 12 | 1 | |
| AG148_bin.48_CGC35 | CGCFAM_00242 | Yes | 8 | 1 | |
| AG148_bin.48_CGC37 | CGCFAM_00247 | Yes | 4 | 1 | |
| AG148_bin.48_CGC33 | CGCFAM_00251 | Yes | 7 | 2 | |
| AG148_bin.48_CGC26 | CGCFAM_00347 | Yes | 10 | 3 | |
| AG148_bin.48_CGC12 | CGCFAM_02489 | Yes | 6 | 5 | |
| AG148_bin.48_CGC9 | CGCFAM_02491 | Yes | 4 | 1 | |
| AG148_bin.48_CGC10 | CGCFAM_03025 | Yes | 4 | 1 | |
| AG148_bin.48_CGC2 | CGCFAM_03221 | Yes | 5 | 1 | |
| AG148_bin.48_CGC32 | CGCFAM_03222 | Yes | 4 | 1 | |
| AG148_bin.48_CGC31 | CGCFAM_04606 | Yes | 10 | 5 | |
| AG148_bin.48_CGC14 | CGCFAM_06993 | Yes | 4 | 1 | |
| AG148_bin.48_CGC15 | CGCFAM_06994 | Yes | 8 | 1 | |
| AG148_bin.48_CGC34 | CGCFAM_06996 | Yes | 13 | 4 |
Top CAZyme Families