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Cluster: AG148_bin.48_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_27671 k141_27671_27 28317 30359 - PL12
CAZyme k141_27671 k141_27671_28 30353 31492 - GH177
TC k141_27671 k141_27671_29 31541 32386 - 3.A.1.1.11
TC k141_27671 k141_27671_30 32379 33308 - 3.A.1.1.11
STP k141_27671 k141_27671_31 33379 34707 - SBP_bac_1
CAZyme k141_27671 k141_27671_32 35692 40227 - CBM32 | GH20
CAZyme k141_27671 k141_27671_33 40301 43564 - GH136
pfam k141_27671 k141_27671_34 43763 47503 - RNA_pol_Rpb1_2 | RNA_pol_Rpb1_3 | RNA_pol_Rpb1_1 | RNA_pol_Rpb1_5 | RNA_pol_Rpb1_4
pfam k141_27671 k141_27671_35 47521 51387 - RNA_pol_Rpb2_6 | RNA_pol_Rpb2_7 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_1 | RNA_pol_Rpb2_3 | RNA_pol_Rpb2_45
CAZyme k141_27671 k141_27671_36 51664 57102 - CBM32 | CBM32 | PL8
Gene ID: k141_27671_27
Type: CAZyme
Location: 28317 - 30359 (-)
Gene ID: k141_27671_28
Type: CAZyme
Location: 30353 - 31492 (-)
Gene ID: k141_27671_29
Type: TC
Location: 31541 - 32386 (-)
Gene ID: k141_27671_30
Type: TC
Location: 32379 - 33308 (-)
Gene ID: k141_27671_31
Type: STP
Location: 33379 - 34707 (-)
Gene ID: k141_27671_32
Type: CAZyme
Location: 35692 - 40227 (-)
Gene ID: k141_27671_33
Type: CAZyme
Location: 40301 - 43564 (-)
Gene ID: k141_27671_34
Type: pfam
Location: 43763 - 47503 (-)
Gene ID: k141_27671_35
Type: pfam
Location: 47521 - 51387 (-)
Gene ID: k141_27671_36
Type: CAZyme
Location: 51664 - 57102 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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