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Cluster: AG148_bin.48_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_125843 k141_125843_2 509 1174 + GT26
pfam k141_125843 k141_125843_3 1392 2483 + HTH_30 | GGDEF_2
TC k141_125843 k141_125843_4 2518 3204 + 3.A.1.140.1
pfam k141_125843 k141_125843_5 3194 4144 + FtsX | FtsX_ECD
STP k141_125843 k141_125843_6 4165 5271 + Peptidase_M23
TC k141_125843 k141_125843_7 5513 6727 + 9.B.174.1.1
TF k141_125843 k141_125843_8 6817 7533 - GntR
pfam k141_125843 k141_125843_9 7697 8401 + Dus | NanE
TC k141_125843 k141_125843_10 8389 8862 + 4.A.6.1.2
TC k141_125843 k141_125843_11 8875 9666 + 4.A.6.1.9
TC k141_125843 k141_125843_12 9677 10486 + 4.A.6.1.19
TC k141_125843 k141_125843_13 10495 10938 + 4.A.6.1.17
Gene ID: k141_125843_2
Type: CAZyme
Location: 509 - 1174 (+)
Gene ID: k141_125843_3
Type: pfam
Location: 1392 - 2483 (+)
Gene ID: k141_125843_4
Type: TC
Location: 2518 - 3204 (+)
Gene ID: k141_125843_5
Type: pfam
Location: 3194 - 4144 (+)
Gene ID: k141_125843_6
Type: STP
Location: 4165 - 5271 (+)
Gene ID: k141_125843_7
Type: TC
Location: 5513 - 6727 (+)
Gene ID: k141_125843_8
Type: TF
Location: 6817 - 7533 (-)
Gene ID: k141_125843_9
Type: pfam
Location: 7697 - 8401 (+)
Gene ID: k141_125843_10
Type: TC
Location: 8389 - 8862 (+)
Gene ID: k141_125843_11
Type: TC
Location: 8875 - 9666 (+)
Gene ID: k141_125843_12
Type: TC
Location: 9677 - 10486 (+)
Gene ID: k141_125843_13
Type: TC
Location: 10495 - 10938 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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