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Genome Details

Selected Rep_genome_ID: AG084_42
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900543975
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG084_42 3,054,501 98.42% 0% NA Africa H3AfricaPhase2
CGMR052791 2,763,507 90.02% 0.05% China Asia CGMR
GCA_021616195.1_ASM2161619v1_genomic 2,952,364 92.15% 1.12% NA Africa H3AfricaPhase1
GCA_021617705.1_ASM2161770v1_genomic 2,711,517 91.83% 1.44% NA Africa H3AfricaPhase1
HRGMv2_0230 3,282,985 98.55% 0.138% South Korea Asia HRGM
MGYG000000534 3,142,227 96.86% 0.05% Fiji Oceania UHGG
Rep_204 3,771,449 93.4911% 0.509259% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
AG084_42_CGC10 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG084_42_CGC9 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG084_42_CGC37 CGCFAM_00016 Yes 9 3 host glycan
AG084_42_CGC1 CGCFAM_00017 Yes 7 2 fructan
AG084_42_CGC2 CGCFAM_00034 Yes 5 1
AG084_42_CGC27 CGCFAM_00068 Yes 7 3
AG084_42_CGC14 CGCFAM_00079 Yes 5 2 pectin
AG084_42_CGC24 CGCFAM_00081 Yes 14 1
AG084_42_CGC39 CGCFAM_00120 Yes 4 1
AG084_42_CGC3 CGCFAM_00183 Yes 8 2 pectin/host glycan
AG084_42_CGC22 CGCFAM_00186 Yes 3 1
AG084_42_CGC8 CGCFAM_00192 Yes 4 1
AG084_42_CGC16 CGCFAM_00265 Yes 3 1 beta-glucan
AG084_42_CGC30 CGCFAM_00352 Yes 5 1
AG084_42_CGC33 CGCFAM_00548 Yes 6 2
AG084_42_CGC21 CGCFAM_00862 Yes 6 2
AG084_42_CGC29 CGCFAM_01003 Yes 8 2
AG084_42_CGC23 CGCFAM_01311 Yes 9 1
AG084_42_CGC38 CGCFAM_01560 Yes 4 2
AG084_42_CGC11 CGCFAM_01615 Yes 3 1
AG084_42_CGC26 CGCFAM_06946 Yes 5 2
AG084_42_CGC36 CGCFAM_06948 Yes 3 1
Top CAZyme Families