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Cluster: AG084_42_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_333568 k141_333568_4 4685 7810 + 1.B.14.6.1
pfam k141_333568 k141_333568_5 7852 9918 + SusD_RagB | SusD-like_3
pfam k141_333568 k141_333568_6 9947 10993 + BT_3987-like_N | BT_3044-like_C | DUF4973
CAZyme k141_333568 k141_333568_7 11102 13150 + GH146
pfam k141_333568 k141_333568_8 13369 14169 + SpoU_methylase
CAZyme k141_333568 k141_333568_9 14819 17152 + GH92
NULL(UNKNOWN) k141_333568 k141_333568_10 17530 17709 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_333568 k141_333568_11 18185 21496 + 1.B.14.6.1
Gene ID: k141_333568_4
Type: TC
Location: 4685 - 7810 (+)
Gene ID: k141_333568_5
Type: pfam
Location: 7852 - 9918 (+)
Gene ID: k141_333568_6
Type: pfam
Location: 9947 - 10993 (+)
Gene ID: k141_333568_7
Type: CAZyme
Location: 11102 - 13150 (+)
Gene ID: k141_333568_8
Type: pfam
Location: 13369 - 14169 (+)
Gene ID: k141_333568_9
Type: CAZyme
Location: 14819 - 17152 (+)
Gene ID: k141_333568_10
Type:
Location: 17530 - 17709 (-)
Gene ID: k141_333568_11
Type: TC
Location: 18185 - 21496 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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