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Cluster: AG084_42_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_25006 k141_25006_40 43052 44272 + GH23
pfam k141_25006 k141_25006_41 44460 45986 + DUF4301
TC k141_25006 k141_25006_42 46269 48164 - 3.A.3.5.18
TF k141_25006 k141_25006_43 48304 48732 - FUR
TC k141_25006 k141_25006_44 48915 49268 + 3.D.1.8.1
TC k141_25006 k141_25006_45 49259 49975 + 3.D.1.6.1
TC k141_25006 k141_25006_46 49994 51565 + 3.D.1.5.1
TC k141_25006 k141_25006_47 51820 52905 + 3.D.1.5.1
STP k141_25006 k141_25006_48 52971 53462 + Fer4
pfam k141_25006 k141_25006_49 53495 53998 + Oxidored_q3
TC k141_25006 k141_25006_50 54001 54309 + 3.D.1.8.1
TC k141_25006 k141_25006_51 54319 56328 + 3.D.1.2.1
TC k141_25006 k141_25006_52 56442 57929 + 3.D.9.1.1
TC k141_25006 k141_25006_53 57984 59417 + 3.D.9.1.1
Gene ID: k141_25006_40
Type: CAZyme
Location: 43052 - 44272 (+)
Gene ID: k141_25006_41
Type: pfam
Location: 44460 - 45986 (+)
Gene ID: k141_25006_42
Type: TC
Location: 46269 - 48164 (-)
Gene ID: k141_25006_43
Type: TF
Location: 48304 - 48732 (-)
Gene ID: k141_25006_44
Type: TC
Location: 48915 - 49268 (+)
Gene ID: k141_25006_45
Type: TC
Location: 49259 - 49975 (+)
Gene ID: k141_25006_46
Type: TC
Location: 49994 - 51565 (+)
Gene ID: k141_25006_47
Type: TC
Location: 51820 - 52905 (+)
Gene ID: k141_25006_48
Type: STP
Location: 52971 - 53462 (+)
Gene ID: k141_25006_49
Type: pfam
Location: 53495 - 53998 (+)
Gene ID: k141_25006_50
Type: TC
Location: 54001 - 54309 (+)
Gene ID: k141_25006_51
Type: TC
Location: 54319 - 56328 (+)
Gene ID: k141_25006_52
Type: TC
Location: 56442 - 57929 (+)
Gene ID: k141_25006_53
Type: TC
Location: 57984 - 59417 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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