Genome Details
Selected Rep_genome_ID: AG040_bin.65
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG040_bin.65 | 2,096,010 | 98.73% | 0.9% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG040_bin.65_CGC5 | CGCFAM_00014 | Yes | 10 | 2 | host glycan |
| AG040_bin.65_CGC9 | CGCFAM_00024 | Yes | 14 | 2 | |
| AG040_bin.65_CGC1 | CGCFAM_00160 | Yes | 4 | 1 | alpha-glucan |
| AG040_bin.65_CGC6 | CGCFAM_00191 | Yes | 8 | 1 | |
| AG040_bin.65_CGC13 | CGCFAM_00230 | Yes | 6 | 2 | |
| AG040_bin.65_CGC4 | CGCFAM_00289 | Yes | 4 | 1 | |
| AG040_bin.65_CGC7 | CGCFAM_00290 | Yes | 7 | 1 | |
| AG040_bin.65_CGC8 | CGCFAM_00594 | Yes | 3 | 1 | |
| AG040_bin.65_CGC14 | CGCFAM_00969 | Yes | 5 | 1 | |
| AG040_bin.65_CGC12 | CGCFAM_01001 | Yes | 7 | 1 |
Top CAZyme Families