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Cluster: AG040_bin.65_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_22247 k141_22247_2 1690 2028 - 4.A.3.1.2
TF k141_22247 k141_22247_3 2243 3247 - LacI
TC k141_22247 k141_22247_4 3605 5380 + 4.A.3.1.1
CAZyme k141_22247 k141_22247_5 5577 7016 + GH1
TF k141_22247 k141_22247_6 7376 8386 - LacI
TC k141_22247 k141_22247_7 8662 10440 + 4.A.3.1.1
CAZyme k141_22247 k141_22247_8 10516 11937 + GH1
TF k141_22247 k141_22247_9 12447 13211 - HTH_DeoR
sulfatase k141_22247 k141_22247_10 13418 14470 + S1_4
TC k141_22247 k141_22247_11 14797 15279 - 4.A.6.1.3
Gene ID: k141_22247_2
Type: TC
Location: 1690 - 2028 (-)
Gene ID: k141_22247_3
Type: TF
Location: 2243 - 3247 (-)
Gene ID: k141_22247_4
Type: TC
Location: 3605 - 5380 (+)
Gene ID: k141_22247_5
Type: CAZyme
Location: 5577 - 7016 (+)
Gene ID: k141_22247_6
Type: TF
Location: 7376 - 8386 (-)
Gene ID: k141_22247_7
Type: TC
Location: 8662 - 10440 (+)
Gene ID: k141_22247_8
Type: CAZyme
Location: 10516 - 11937 (+)
Gene ID: k141_22247_9
Type: TF
Location: 12447 - 13211 (-)
Gene ID: k141_22247_10
Type: sulfatase
Location: 13418 - 14470 (+)
Gene ID: k141_22247_11
Type: TC
Location: 14797 - 15279 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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