dbCAN Logo

Cluster: AG040_bin.65_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_199331 k141_199331_12 10238 11032 - 3.A.1.34.1
TC k141_199331 k141_199331_13 11025 11948 - 3.A.1.34.1
TC k141_199331 k141_199331_14 12153 13133 - 3.A.1.34.1
NULL(UNKNOWN) k141_199331 k141_199331_15 13294 14079 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_199331 k141_199331_16 14340 15743 - tRNA-synt_2 | tRNA_anti-codon
TC k141_199331 k141_199331_17 15925 16488 - 4.A.1.2.6
peptidase k141_199331 k141_199331_18 16733 17635 + S09.UPW
TC k141_199331 k141_199331_19 17820 20180 + 9.A.8.1.6
TC k141_199331 k141_199331_20 20495 22159 + 4.A.1.1.3
TF k141_199331 k141_199331_21 22222 22974 - HTH_6
CAZyme k141_199331 k141_199331_22 23150 24523 + GH4
NULL(UNKNOWN) k141_199331 k141_199331_23 24689 25441 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_199331 k141_199331_24 25617 26813 + 2.A.1.2.18
CAZyme k141_199331 k141_199331_25 26967 28343 + GH13_20
Gene ID: k141_199331_12
Type: TC
Location: 10238 - 11032 (-)
Gene ID: k141_199331_13
Type: TC
Location: 11025 - 11948 (-)
Gene ID: k141_199331_14
Type: TC
Location: 12153 - 13133 (-)
Gene ID: k141_199331_15
Type:
Location: 13294 - 14079 (-)
Gene ID: k141_199331_16
Type: pfam
Location: 14340 - 15743 (-)
Gene ID: k141_199331_17
Type: TC
Location: 15925 - 16488 (-)
Gene ID: k141_199331_18
Type: peptidase
Location: 16733 - 17635 (+)
Gene ID: k141_199331_19
Type: TC
Location: 17820 - 20180 (+)
Gene ID: k141_199331_20
Type: TC
Location: 20495 - 22159 (+)
Gene ID: k141_199331_21
Type: TF
Location: 22222 - 22974 (-)
Gene ID: k141_199331_22
Type: CAZyme
Location: 23150 - 24523 (+)
Gene ID: k141_199331_23
Type:
Location: 24689 - 25441 (+)
Gene ID: k141_199331_24
Type: TC
Location: 25617 - 26813 (+)
Gene ID: k141_199331_25
Type: CAZyme
Location: 26967 - 28343 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_199331_23 vegan > omnivore 1.27479 0.01057

🧭 Explore Read Mapping of CGC

← Back to Cluster List