Genome Details
Selected Rep_genome_ID: AG024_bin.36
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG024_bin.36 | 2,138,171 | 97.58% | 3.07% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG024_bin.36_CGC13 | CGCFAM_00008 | Yes | 5 | 2 | |
| AG024_bin.36_CGC14 | CGCFAM_00014 | Yes | 10 | 3 | host glycan |
| AG024_bin.36_CGC5 | CGCFAM_00019 | Yes | 9 | 1 | |
| AG024_bin.36_CGC9 | CGCFAM_00154 | Yes | 6 | 2 | |
| AG024_bin.36_CGC6 | CGCFAM_00182 | Yes | 11 | 1 | |
| AG024_bin.36_CGC3 | CGCFAM_00289 | Yes | 5 | 1 | |
| AG024_bin.36_CGC2 | CGCFAM_00325 | Yes | 5 | 1 | |
| AG024_bin.36_CGC12 | CGCFAM_00464 | Yes | 5 | 3 | |
| AG024_bin.36_CGC18 | CGCFAM_01070 | Yes | 3 | 2 | |
| AG024_bin.36_CGC10 | CGCFAM_02454 | Yes | 3 | 1 | |
| AG024_bin.36_CGC8 | CGCFAM_02917 | Yes | 4 | 1 | |
| AG024_bin.36_CGC4 | CGCFAM_04503 | Yes | 9 | 1 |
Top CAZyme Families