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Cluster: AG024_bin.36_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_81253 k141_81253_2 1598 1936 - 4.A.3.1.2
TF k141_81253 k141_81253_3 2150 3154 - LacI
TC k141_81253 k141_81253_4 3511 5286 + 4.A.3.1.1
CAZyme k141_81253 k141_81253_5 5353 6792 + GH1
TF k141_81253 k141_81253_6 7063 8100 - LacI
CAZyme k141_81253 k141_81253_7 8442 9884 + GH1
TC k141_81253 k141_81253_8 10061 11821 + 4.A.3.1.1
TF k141_81253 k141_81253_9 11998 13008 - LacI
TC k141_81253 k141_81253_10 13284 15062 + 4.A.3.1.1
CAZyme k141_81253 k141_81253_11 15138 16559 + GH1
Gene ID: k141_81253_2
Type: TC
Location: 1598 - 1936 (-)
Gene ID: k141_81253_3
Type: TF
Location: 2150 - 3154 (-)
Gene ID: k141_81253_4
Type: TC
Location: 3511 - 5286 (+)
Gene ID: k141_81253_5
Type: CAZyme
Location: 5353 - 6792 (+)
Gene ID: k141_81253_6
Type: TF
Location: 7063 - 8100 (-)
Gene ID: k141_81253_7
Type: CAZyme
Location: 8442 - 9884 (+)
Gene ID: k141_81253_8
Type: TC
Location: 10061 - 11821 (+)
Gene ID: k141_81253_9
Type: TF
Location: 11998 - 13008 (-)
Gene ID: k141_81253_10
Type: TC
Location: 13284 - 15062 (+)
Gene ID: k141_81253_11
Type: CAZyme
Location: 15138 - 16559 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_81253_6 vegetarian > omnivore 1.03858 0.02242

🧭 Explore Read Mapping of CGC

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