Cluster: AG024_bin.36_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG024_bin.36
- CGC Family ID: CGCFAM_00182
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_88064 | k141_88064_7 | 4691 | 5929 | - | GT4 |
| pfam | k141_88064 | k141_88064_8 | 5943 | 6707 | - | BcrAD_BadFG |
| pfam | k141_88064 | k141_88064_9 | 6759 | 7922 | - | HGD-D |
| TC | k141_88064 | k141_88064_10 | 8000 | 8785 | - | 3.A.1.5.36 |
| TC | k141_88064 | k141_88064_11 | 8772 | 9770 | - | 3.A.1.5.35 |
| TC | k141_88064 | k141_88064_12 | 9774 | 10601 | - | 3.A.1.5.39 |
| TC | k141_88064 | k141_88064_13 | 10601 | 11554 | - | 3.A.1.5.11 |
| TC | k141_88064 | k141_88064_14 | 11641 | 13251 | - | 3.A.1.5.11 |
| pfam | k141_88064 | k141_88064_15 | 13436 | 14719 | - | HGD-D |
| TC | k141_88064 | k141_88064_16 | 15169 | 16239 | - | 3.A.1.1.3 |
| TC | k141_88064 | k141_88064_17 | 16243 | 17724 | - | 3.A.1.8.1 |
Gene ID: k141_88064_7
Type: CAZyme
Location: 4691 - 5929 (-)
Type: CAZyme
Location: 4691 - 5929 (-)
Gene ID: k141_88064_8
Type: pfam
Location: 5943 - 6707 (-)
Type: pfam
Location: 5943 - 6707 (-)
Gene ID: k141_88064_9
Type: pfam
Location: 6759 - 7922 (-)
Type: pfam
Location: 6759 - 7922 (-)
Gene ID: k141_88064_10
Type: TC
Location: 8000 - 8785 (-)
Type: TC
Location: 8000 - 8785 (-)
Gene ID: k141_88064_11
Type: TC
Location: 8772 - 9770 (-)
Type: TC
Location: 8772 - 9770 (-)
Gene ID: k141_88064_12
Type: TC
Location: 9774 - 10601 (-)
Type: TC
Location: 9774 - 10601 (-)
Gene ID: k141_88064_13
Type: TC
Location: 10601 - 11554 (-)
Type: TC
Location: 10601 - 11554 (-)
Gene ID: k141_88064_14
Type: TC
Location: 11641 - 13251 (-)
Type: TC
Location: 11641 - 13251 (-)
Gene ID: k141_88064_15
Type: pfam
Location: 13436 - 14719 (-)
Type: pfam
Location: 13436 - 14719 (-)
Gene ID: k141_88064_16
Type: TC
Location: 15169 - 16239 (-)
Type: TC
Location: 15169 - 16239 (-)
Gene ID: k141_88064_17
Type: TC
Location: 16243 - 17724 (-)
Type: TC
Location: 16243 - 17724 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_88064_10 | vegan > omnivore | 2.90036 | 0.02691 |
| k141_88064_11 | vegan > omnivore | 1.38233 | 0.02691 |
| k141_88064_12 | vegan > omnivore | 3.20313 | 0.02691 |
| k141_88064_13 | vegan > omnivore | 2.95946 | 0.02691 |
| k141_88064_14 | vegan > omnivore | 3.24829 | 0.02691 |